Course:APBI235/Syllabus

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Date Unit Course Content Readings Instructor
Lecture 1 Introduction Course Introduction and overview Chapter 1 SL, VM
Lecture 2 Fundamental Cellular Biology and Genetics Cell structure, chromosome structure, DNA replication Chapter 2: pp 26-38 VM
Lecture 3 Genetic mapping of traits VM
Lecture 4 RNA and protein synthesis, mutation causes and consequences Chapter 2: pp 39-56 VM
Lecture 5 Proteins as products Chapter 4 VM
Lecture 6 Enter the Genome Era Genomics and systems biology concepts - think big SL
Lecture 7 Genomic sequencing and bioinformatics Chapter 3: pp 68-71; 78-80 SL
Lecture 8 Functional genomics - Expression profiling and gene discovery SL
Lecture 9 Molecular markers and genetic mapping SL
Lecture 10 Agricultural Biotechnology - Genetic Engineering Molecular biology toolbox - Recombinant DNA technology
  • practical features of vectors
  • restriction enzymes, PCR, cloning PCR products
VM
Lecture 11 Molecular biology toolbox - Control of gene expression in vivo
  • promoters, promoter activity, altering gene expression levels
SL
Lecture 12 CLass exercises in gene cloning SL, VM
Lecture 13 Genetic engineering in animals and plants
  • expression constructs, gene delivery systems
SL
Lecture 14 Assaying genetic engineering outcomes
  • transgene copy number, expression levels, phenotype
  • 'substantial equivalence' concept
SL
Lecture 15 Review and discuss lectures 1-14 SL, VM
Lecture 16 MIDTERM EXAM
Lecture 17 Guest lecture on applications of natural plant products to pest control
  • Dr. Murray Isman, Faculty of LFS
Lecture 18 Guest lecture on biomarker technologies for agricultural food production and food safety monitoring
  • Dr. Kevin Allen, Faculty of LFS
Lecture 19 Student led discussion on non-GM biotechnology applications to food production
Lecture 20 Genetic engineering - Application to fermentation product improvement Chapter 5: pp 127-135; 141-144 VM
READING WEEK
Lecture 21 Student led discussion on microbial biotech
Lecture 22 Genetic engineering - Applications to agricultural crop improvement Chapter 6: pp 156-170 SL
Lecture 23 Student led discussion on crop biotech
Lecture 24 Genetic engineering - Applications to livestock improvement Chapter 7: pp 172-188 SL
Lecture 25 Guest Lecture on biotech in livestock productivity
  • Dr. Ronaldo Cerri, Faculty of LFS
Lecture 26 Student led discussion on biotech in livestock production
Lecture 27 Genetic engineering - Applications to aquaculture improvement Chapter 10: pp 232-244; 245-259 (omit section on GFP) VM
Lecture 28 Guest lecture on aquaculture
  • Dr. Robert Devlin, Centre for Aquatic Biotechnology Regulatory Research (CABRR), Fisheries and Oceans Canada, West Vancouver, BC
Lecture 29 Student led discussion on aquaculture
Lecture 30 Genetic engineering - Applications to bioremediation Chapter 9: pp 209-230 VM
Lecture 31 Guest lecture on biotechnology in bioremediation
  • Dr. William Mohn, UBC Department of Microbiology and Immunology
Lecture 32 Student led discussion on bioremediation
Lecture 33 NO CLASS
Lecture 34 Biotechnology policy 1 - Regulating biotechnology innovations
  • Plants with Novel Traits, food labelling, health and environmental concerns
SL
Lecture 35 Values and ethics in agricultural biotechnology, guest lecture
  • Dr. Robin Downey, Genome British Columbia, Vancouver BC
Chapter 13: pp 325-342
Lecture 36 Biotechnology policy 2 - Intellectual property issues associated with biotechnology innovations
  • Dr. Emily Marden, UBC Sauder School of Business
Lecture 37 Student led discussion on IP and safety in agricultural biotechnology